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Home Q&AWhy was Restriction enzyme digestion unsuccessful?

Plasmid DNA Extraction Kit(PD004, PD100, PD300) --Q&A
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Q
Q
Q Can the plasmid DNA extraction Kit be applied on Gram (+) bacteria?
Q Why do we get eluted plasmid contaminated with RNA?
Q Why can¡¦t the eluted plasmid be cut by restriction enzymes properly?
Q Why does the Plasmid DNA Extraction Kit require two washings with two types of wash buffers (W1 and Wash Buffer) while competitors kits require one washing?
Q Eluted plasmid appeared degraded after storage for an extended period of time.
Q Why was Restriction enzyme digestion unsuccessful?
A There are a few possible reasons that could lead to failure in restriction enzyme performance of extracted plasmid.
(1) Enzyme Activity: Most restriction enzymes are temperature sensitive. Prolonged storage or usage past expiry date will decrease enzyme activity dramatically,
                               hence causing partial or total failure of plasmid cutting.
(2) Sensitivity: Different strains of E. Coli will have varying sensitivity to dam or dcm Methylation. If digestion sites were blocked by overlapping dam or
                     dcm Methylation during transformation, it will cause difficulty at the restriction enzyme digestion step.
(3) Plasmid Concentration: High concentrations of final extracted plasmid will cause similar problems.

Genomic DNA Extraction Kit(GT004,GT050,GT300,GB004,GB100,GB300,GP004,GP100)--Q&A
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Q
Q
Q Why doesn¡¦t the Eluted DNA perform well in downstream applications?
Q Why does the genomic DNA band appear smeared in agarose gel electrophoresis?
Q What is the key to successfully isolating genomic DNA of good yield and quality?
Q Why does the sample appear viscous after sample Lysis and not pass through the column easily, even when less than the suggested maximum sample amount is used?
Q When Buffy coat is used, the column tends to be clogged.

Gel/PCR DNA Fragments Extraction Kit (DF004, DF100, DF300)--Q&A

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